PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC010131.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 339aa    MW: 37433.4 Da    PI: 6.7203
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC010131.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.4e-09254295955
                   HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                    ++RR+ri +++  L++l+P+ +      K++ +++LekA+ Y+k Lq
  EcC010131.20 254 AKNRRERISERLKILQDLVPNgN------KVDLVTMLEKAISYVKFLQ 295
                   69*******************55......******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-14244305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-12245302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.046245294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.83E-11251299No hitNo description
SMARTSM003532.2E-11251300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-6255295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0015693Biological Processmagnesium ion transport
GO:0016021Cellular Componentintegral component of membrane
GO:0015095Molecular Functionmagnesium ion transmembrane transporter activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MDLIDSRLGL LQPPHSYSKD GNNNKETPPQ LSDLSSQGSY GYDEYQKLGF EEEDNLEKTT  60
ALMSKNFAPS VCGPSMDALK FRAMNNRPEG VHHQPLINFK SNGGYENFRQ ASGSLLSFQQ  120
SQTVDLKNSD CFGWKDDGIM SNYNYHNLRQ IDPKSSSDHP RIVEDVNCYQ SSSTYVVHNA  180
VLKHGNSSSN WLYSEATAVA DSVQESGAQE AGFHKRAYTG ENAQTSKKQC TSASKSSSKS  240
KSPSSPKDPQ SVAAKNRRER ISERLKILQD LVPNGNKVDL VTMLEKAISY VKFLQLQVKV  300
LATDEFWPAQ GGKAPDISQV KEAIDAILSS QRDGSSSSE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062245.10.0PREDICTED: putative transcription factor bHLH086
SwissprotQ9FJ009e-67BH086_ARATH; Putative transcription factor bHLH086
TrEMBLA0A059BUN50.0A0A059BUN5_EUCGR; Uncharacterized protein (Fragment)
STRINGVIT_14s0006g01470.t011e-100(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM42602854
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.13e-55RHD SIX-LIKE 1